Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936275.1_cds_XP_016481899.1_73180
CDS Infomation

[gene=LOC107802836] [db_xref=GeneID:107802836] [protein=probable xyloglucan 6-xylosyltransferase 5] [protein_id=XP_016481899.1] [location=44492..45853] [gbkey=CDS]
Sequence

ATGGGTCCAGACAGCAGTTTCGCAGCTCAGAAAAGAGGTGGTGGAGCACTACCTACCACC
GCCACTCCCAACGGCGGCCGTGCCAGTTCCGTCTTACCTCGCGGCCGACAGATCCAACGT
ACTTTCAACAACATTAAGATCACTATTCTTTGCGGCTTCGTCACTATCCTTGTCCTACGT
GGCACCATTGGTTTCGGCAACCTCGCATCCTCCGGAAGTGATGCTGAGAATGCGAATCTT
ATCGAAGAGACTAACCGGATCCTCGACGAGATCCGATCCGACAAGGACCCGGATGACCCG
GTTGACCAGTCCGATAGTTTTTTCCGACTTAATTCAACTTACAGTTTAGGCCCGAAGATT
ACTACTTGGGATGCCGACCGCAAATTCTGGCTTCAGAAAAACCCTGATTTCCCTAATTTT
ATTCATGGTAAGCCTCGAGTTTTGCTGGTAACTGGCTCTCCCCCAAACCCTTGTGATAAT
CCAATTGGGGATCATTACTTGTTGAAGGTTATAAAGAACAAAATTGATTATTGTAGGATC
CATGGGATTGAAATCGTTTATAATTTAGCTCATTTGGAAAAGGAAATGGCTGGGTACTGG
GCTAAATTGCCCTTGATTCGCAAGCTAATGTTGTCTCACCCTGAAGTAGAATGGATTTGG
TGGATGGACAGTGATGCCTTATTCACTGATATGGTCTTTGAGATCCCTTTTTCCAAGTAC
AATGATCACAATCTTGTTATTCATGGCTACCCTGATCTATTGTTTGATCAGAAATCATGG
ATTGCATTGAACACTGGTAGTTTTCTAATTAGGAATTGCCAGTGGTCTCTTGATTTGTTG
GATGCGTGGGCGCCAATGGGGCCTAAAGGTCCTGTTCGTGAAGAAGCTGGGAAGGTTTTG
ACGGCTAATTTAAAGGGTAGACCAGCATTTGAAGCGGATGATCAGTCTGCATTAATATAC
TTGTTGATGTCACAGAAGGATCAGTGGATGGACCAGGTGTTCATTGAGAATTCCTACTAT
CTACACGGATATTGGGCTGGGTTAGTTGATAGGTATGAGGAGATGATTGAGAAATACCAT
CCAGGTTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTGGGATGCAAGCCATGT
GGGATTTATGGAGATTACCCTGTTGAGAGGTGCATGAAAAGTATTGAGAGGGCTTTCAAT
TTTGCAGATAATCAGGTGCTTAAGTTGTATGGGTTTAGACATAAGGGCTTGTTGAGCCCT
AACATCAAAAGGATTAGGAATGAAACTGATAATCCGCTGCAGTATGTAGATCAGTTAGAT
GTTCGACATGCAAAGCATGAGAGCACAGGACCTCAGAGCTAG

Peptide Sequence

PEP ID

XP_016481899.1
PEP Infomation

PREDICTED: probable xyloglucan 6-xylosyltransferase 5 [Nicotiana tabacum]
Sequence

MGPDSSFAAQKRGGGALPTTATPNGGRASSVLPRGRQIQRTFNNIKITILCGFVTILVLR
GTIGFGNLASSGSDAENANLIEETNRILDEIRSDKDPDDPVDQSDSFFRLNSTYSLGPKI
TTWDADRKFWLQKNPDFPNFIHGKPRVLLVTGSPPNPCDNPIGDHYLLKVIKNKIDYCRI
HGIEIVYNLAHLEKEMAGYWAKLPLIRKLMLSHPEVEWIWWMDSDALFTDMVFEIPFSKY
NDHNLVIHGYPDLLFDQKSWIALNTGSFLIRNCQWSLDLLDAWAPMGPKGPVREEAGKVL
TANLKGRPAFEADDQSALIYLLMSQKDQWMDQVFIENSYYLHGYWAGLVDRYEEMIEKYH
PGLGDERWPFVTHFVGCKPCGIYGDYPVERCMKSIERAFNFADNQVLKLYGFRHKGLLSP
NIKRIRNETDNPLQYVDQLDVRHAKHESTGPQS

Transcript Sequence

Gene sequence data has not been registered.